C68Y0ACXX_l08n01_40255-1.341000000357f8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l08n01_40255-1.341000000357f8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7809676
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTAT	205500	2.631351159766423	TruSeq Adapter, Index 7 (97% over 38bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18140	0.23227596125626723	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	12366	0.1583420362125138	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10361	0.1326687560405835	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	10100	0.12932674799825242	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	9689	0.12406404567871958	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	35640	63.807842	4
TCGGAAG	35860	63.416386	3
GATCGGA	36510	62.40846	1
GAAGAGC	36900	61.58712	6
ATCGGAA	37245	61.045418	2
GGAAGAG	41930	54.4029	5
GCCGTCT	26260	43.041683	50-51
ATGCCGT	26280	42.799423	48-49
TATGCCG	26155	42.713406	48-49
TGCCGTC	26310	42.60783	50-51
TCGTATG	26635	42.52942	44-45
CGTATGC	26445	42.30529	46-47
TCTCGTA	26340	42.149223	42-43
CGTCTTC	26885	42.01593	52-53
CTCGTAT	26395	41.971428	44-45
CATCTCG	26370	41.937298	40-41
ATCTCGT	26360	41.63076	42-43
GTATGCC	27265	41.337803	46-47
TGTGTTT	88710	41.00401	1
GTCACGA	27895	40.146877	28-29