FastQCFastQC Report
Thu 15 Oct 2015
C68Y0ACXX_l07n02_35010-1.342000000357e8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC68Y0ACXX_l07n02_35010-1.342000000357e8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6944751
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGGC14750.053.40389
CGGGAGA21100.053.3312644
AGAGCGG16800.051.124438
GATCGGG29200.050.7531741
GAGAGCG19500.048.9136437
ATCGGGA30200.044.818822
GATCCGG6400.039.335741
CGGAAAG11950.039.3353735
TTGTGTT554100.038.6358831
AGCGGCG13350.038.033110-11
GGCGCCG15350.036.50380756-57
TCGGGAG31950.036.261383
CCGGATC9400.035.860460-61
CGCCGTA16250.035.50265558-59
TGTGTTT986450.035.4978181
CGCCGGA8850.035.4110358-59
GTCGCCG16100.034.21343656-57
TCGCCGT13650.034.0924356-57
CGATCGC702.0544554E-433.9284021
GGGCGCC22500.033.87485554-55
Produced by FastQC (version 0.11.2)