C68Y0ACXX_l07n01_40825-1.341000000356f9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l07n01_40825-1.341000000356f9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1850838
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT	72806	3.933677609817823	TruSeq Adapter, Index 27 (97% over 39bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14242	0.7694892799910095	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	4181	0.2258976744588127	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4107	0.22189948553033817	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	3710	0.20044974222487325	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATATCGTAT	2191	0.11837881003091573	TruSeq Adapter, Index 27 (97% over 39bp)
GTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1853	0.1001168119522076	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	11420	69.959465	4
ATCGGAA	11445	69.14261	2
GATCGGA	11575	68.64334	1
TCGGAAG	11725	67.612976	3
GAAGAGC	11815	67.57124	6
GGAAGAG	13895	57.72966	5
GAGCACA	15150	52.696648	9
AAGAGCA	15520	51.348545	7
AGAGCAC	15845	50.41522	8
TATGCCG	9185	43.334503	48-49
GTATGCC	9280	43.06944	46-47
GATCTCG	8920	42.808582	40-41
TACTCGA	9155	42.77206	36-37
CTCGTAT	9050	42.641457	44-45
GCCGTCT	9425	42.46067	50-51
TCGTATG	9475	42.43312	44-45
ACTCGAT	9265	42.28988	36-37
TCGATCT	9010	42.274403	38-39
TCTCGTA	9165	42.183567	42-43
CTCGATC	8970	42.14524	38-39