C68Y0ACXX_l07n01_40255-1.341000000357f8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l07n01_40255-1.341000000357f8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7740804
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTAT	209053	2.7006626185083618	TruSeq Adapter, Index 7 (97% over 38bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17123	0.22120441235819946	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	12231	0.1580068427000606	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10340	0.1335778557369493	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	9665	0.12485783130537861	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	9635	0.12447027466397546	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	35120	64.89402	4
TCGGAAG	35055	64.67559	3
GATCGGA	35860	63.484394	1
GAAGAGC	36120	63.099945	6
ATCGGAA	36425	62.308243	2
GGAAGAG	41015	55.719715	5
GCCGTCT	26280	43.322502	50-51
TATGCCG	26340	43.068874	48-49
TGCCGTC	26395	42.98979	50-51
ATGCCGT	26420	42.94745	48-49
TCGTATG	26740	42.770145	44-45
CGTATGC	26610	42.755985	46-47
TCTCGTA	26395	42.51101	42-43
CTCGTAT	26420	42.47922	44-45
CATCTCG	26200	42.40085	40-41
CGTCTTC	26985	42.219532	52-53
ATCTCGT	26375	42.129063	42-43
GTATGCC	27400	41.592575	46-47
CGAGATT	27505	40.6557	32-33
GTCACGA	27625	40.57287	28-29