C68Y0ACXX_l06n02_40255-1.342000000357f5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l06n02_40255-1.342000000357f5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7572970
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCT	23595	0.3115686447985401	Illumina Single End PCR Primer 1 (96% over 32bp)
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	13794	0.18214782311299266	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10510	0.13878306661719245	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	10447	0.1379511605090209	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	9708	0.12819276981157987	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8469	0.11183194968420579	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8070	0.10656321099911924	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGGC	3130	79.154526	9
ATCGGGA	4595	78.962845	2
AGAGCGG	3550	71.65936	8
CGGGAGA	4220	68.77784	4
CGGAAAG	1945	65.10044	5
AAGCGGC	1240	60.360638	9
TCGGGAA	1600	57.50539	3
TCGGGAG	5200	56.730133	3
GTTCGGA	635	54.525043	2
GATCGGG	7090	54.06026	1
ATTCGGA	800	52.172256	2
GAGAGCG	5380	52.038364	7
GGTTCGG	885	51.45659	1
GATCCGG	1155	51.338245	1
GGATCGG	1545	47.590057	1
TCGGAAA	1765	47.55959	4
TCGGAGA	1060	47.42524	4
GGTCCGG	420	46.3071	1
AAGCGTC	580	45.738136	9
AGAGCGT	16665	44.65786	8