C68Y0ACXX_l06n01_40825-1.341000000356f9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l06n01_40825-1.341000000356f9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1820722
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT	71832	3.945248093888029	TruSeq Adapter, Index 27 (97% over 39bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12927	0.7099930686837419	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	3953	0.21711167328125874	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	3738	0.2053031709398799	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3710	0.20376531947216545	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATATCGTAT	2361	0.12967383268835111	TruSeq Adapter, Index 27 (97% over 39bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	11060	71.53611	4
GATCGGA	11190	71.31093	1
ATCGGAA	11190	70.79575	2
TCGGAAG	11315	69.96591	3
GAAGAGC	11430	69.38661	6
GGAAGAG	13575	58.562702	5
GAGCACA	14850	53.566566	9
AAGAGCA	15165	52.328648	7
AGAGCAC	15490	51.261383	8
TATGCCG	9155	43.01392	48-49
GATCTCG	8925	42.944405	40-41
GTATGCC	9240	42.8478	46-47
TACTCGA	9145	42.66083	36-37
CTCGTAT	8980	42.60614	44-45
TCTCGTA	9025	42.55101	42-43
GCCGTCT	9300	42.52321	50-51
ATGCCGT	9360	42.300217	48-49
TCGTATG	9420	42.280018	44-45
CTCGATC	9010	42.193157	38-39
TGCCGTC	9345	42.089695	50-51