C68Y0ACXX_l06n01_34298-1.341000000357c1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l06n01_34298-1.341000000357c1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5257116
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTCATTATCTCGTAT	121174	2.304951992689528	TruSeq Adapter, Index 2 (97% over 37bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14391	0.2737432462970191	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	12775	0.24300395882457226	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	11903	0.22641691756468754	No Hit
GTGTTTGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTTAGTTCAA	8732	0.16609867463453346	No Hit
TGTGTTTGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTTAGTTCA	8102	0.1541149177609929	No Hit
TTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGA	5949	0.11316090419157575	No Hit
GTGTTTGAGGGGGTCTTAGCTTTGGCTCTCCTTGCAAAGTTATTTCTAGT	5389	0.10250867585953971	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGGAAG	19430	0.0	70.39393	3
CGGAAGA	19435	0.0	70.22787	4
GATCGGA	19725	0.0	69.39894	1
GAAGAGC	19860	0.0	68.820656	6
ATCGGAA	20055	0.0	68.132996	2
GGAAGAG	21090	0.0	64.85197	5
GCGCGAC	45	1.5178202E-5	52.7713	2
GGTTCGC	60	1.4951638E-6	47.491463	3
GCCGTCT	15435	0.0	43.99241	50-51
CGTCTTC	15490	0.0	43.883244	52-53
ATGCCGT	15500	0.0	43.51534	48-49
TATGCCG	15430	0.0	43.481876	48-49
TCGTATG	15645	0.0	43.472637	44-45
TGCCGTC	15580	0.0	43.323833	50-51
CGTATGC	15540	0.0	43.29429	46-47
CTCGTAT	15620	0.0	43.146935	44-45
TCTCGTA	15725	0.0	43.084538	42-43
TGCCGGC	200	0.0	42.744755	2
CTGCTTG	15955	0.0	42.709305	58-59
ATCTCGT	15835	0.0	42.650272	42-43