C68Y0ACXX_l05n02_34302-1.342000000358e7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l05n02_34302-1.342000000358e7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8398502
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	17300	0.20598911567801018	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	16190	0.1927724729957795	No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCTTCGCCTGTGTAGATCT	13775	0.1640173449979532	Illumina Single End PCR Primer 1 (96% over 32bp)
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	13420	0.15979040071669923	No Hit
TTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGA	13329	0.1587068741544623	No Hit
GTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC	11774	0.14019166751404	No Hit
TGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG	10883	0.1295826327123575	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10194	0.12137878874113502	No Hit
TTGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCA	9894	0.11780672315134294	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGGC	5565	85.19238	9
CGGGAGA	8050	83.15326	4
AGAGCGG	5965	81.86444	8
GAGAGCG	7045	77.46108	7
AAGCGGC	2220	77.09393	9
CGGAAAG	3680	75.79786	5
TCGGGAG	8970	71.71931	3
ATTCGGA	1145	71.690865	2
ACCGGAA	1295	71.43873	3
TCGGGAA	3030	69.67648	3
TCGGAGA	2005	67.90717	4
GTTCGGA	1050	67.78369	2
GATCCGG	1600	65.845116	1
GAACCGG	1095	65.44153	1
GGATCGG	3080	65.020805	1
CGGAGAG	3470	62.202713	5
GATCGGG	13250	61.925526	1
AACCGGA	1130	60.88535	2
ATCGGGA	13090	60.207863	2
AGAGCGT	17180	58.91736	8