C68Y0ACXX_l05n01_40825-1.341000000356f9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l05n01_40825-1.341000000356f9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1864159
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT	69685	3.7381467997096816	TruSeq Adapter, Index 27 (97% over 39bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14168	0.7600210067918026	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	4132	0.22165491248332359	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4129	0.2214939820047539	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	3826	0.2052400036692149	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATATCGTAT	2212	0.11865940619872016	TruSeq Adapter, Index 27 (97% over 39bp)
GTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1906	0.1022444973846115	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	10945	71.081696	4
ATCGGAA	11080	70.472824	2
GATCGGA	11125	70.28392	1
GAAGAGC	11230	69.4799	6
TCGGAAG	11275	69.21188	3
GGAAGAG	13615	57.378555	5
GAGCACA	14665	53.14078	9
AAGAGCA	14930	52.165745	7
AGAGCAC	15470	50.529026	8
TATGCCG	8940	43.270298	48-49
GTATGCC	9010	43.013195	46-47
CTCGTAT	8625	42.78566	44-45
GATCTCG	8565	42.77926	40-41
TCGTATG	9100	42.561695	44-45
TACTCGA	8865	42.53696	36-37
GCCGTCT	9175	42.427094	50-51
TCGATCT	8640	42.270493	38-39
ATGCCGT	9180	42.21666	48-49
CTCGATC	8575	42.203217	38-39
TTACTCG	9120	42.1276	34-35