C68Y0ACXX_l05n01_40255-1.341000000357f8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l05n01_40255-1.341000000357f8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7760650
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTAT	197286	2.542132424474754	TruSeq Adapter, Index 7 (97% over 38bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16931	0.21816471558439046	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	12571	0.1619838544451818	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10480	0.13504023503185944	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	9933	0.12799185635223853	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	9851	0.1269352438262259	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	34485	63.65086	4
TCGGAAG	34680	63.361446	3
GATCGGA	35350	62.33637	1
GAAGAGC	35745	61.340992	6
ATCGGAA	36055	61.01096	2
GGAAGAG	39890	55.193207	5
GCCGTCT	25270	43.35576	50-51
ATGCCGT	25220	43.172882	48-49
TGCCGTC	25325	42.99901	50-51
TATGCCG	25200	42.96213	48-49
TCGTATG	25465	42.850082	44-45
CGTATGC	25395	42.6035	46-47
TCTCGTA	25330	42.262962	42-43
CTCGTAT	25300	42.200306	44-45
CGTCTTC	25940	42.182896	52-53
CATCTCG	25340	41.85147	40-41
GTATGCC	26235	41.61053	46-47
ATCTCGT	25450	41.57848	42-43
GTCACGA	26830	40.20617	28-29
CGAGATT	26675	40.15572	32-33