C68Y0ACXX_l04n02_40255-1.342000000357f5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l04n02_40255-1.342000000357f5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7707756
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCT	15505	0.20116101236209347	Illumina Single End PCR Primer 1 (96% over 32bp)
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	14511	0.18826491134384638	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	10771	0.13974235821684028	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10728	0.13918447859532657	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	10161	0.13182825195815748	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8991	0.11664873667511012	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8624	0.11188729897521406	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCGGGA	4465	77.26389	2
GAGCGGC	2910	74.3342	9
CGGGAGA	3855	70.15849	4
AGAGCGG	3240	68.816444	8
CGGAAAG	1805	63.0876	5
AAGCGGC	1235	62.22499	9
ATTCGGA	875	60.197514	2
TCGGGAA	1605	57.94582	3
GTTCGGA	655	57.233383	2
GGATCGG	1810	55.06062	1
TCGGGAG	5160	54.16349	3
GATCGGG	7015	52.361687	1
TCGGAGA	1230	51.306957	4
TCGGAAA	1895	50.579193	4
GAGAGCG	4855	50.12717	7
AAGCGTC	540	49.19388	9
TTGTGTT	62375	45.117443	1
GGTTCGG	1045	44.50514	1
GATCCGG	1200	43.10678	1
CGGAGAG	2040	42.562866	5