C68Y0ACXX_l04n02_34098-1.34200000035704.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l04n02_34098-1.34200000035704.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2339526
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	3551	0.1517828825155181	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	3234	0.13823312927490441	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	3121	0.1334030910534869	No Hit
TGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG	2848	0.12173406066015081	No Hit
GTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC	2825	0.12075095553543752	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	2667	0.11399745076566793	No Hit
TGTGTTTGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGT	2659	0.11365550115707199	No Hit
GTGTTTGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTT	2521	0.10775687040879221	No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTCTTCGCCTGTGTAGATCT	2452	0.10480755503465232	Illumina Single End PCR Primer 1 (96% over 32bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGAGA	2245	0.0	83.47005	4
GAGCGGC	1670	0.0	82.351845	9
ATTCGGA	325	0.0	81.75076	2
AGAGCGG	1765	0.0	80.8766	8
CGGAAAG	1220	0.0	78.545784	5
GATCCGG	515	0.0	78.31676	1
TCGGGAG	2390	0.0	76.422646	3
GAGAGCG	2295	0.0	73.77748	7
GAACCGG	415	0.0	73.17704	1
TCGGAGA	555	0.0	72.65673	4
GGATCGG	910	0.0	72.4797	1
AGTCGCG	20	0.002083962	71.16696	2
AAGCGGC	690	0.0	70.79131	9
AACCGGA	410	0.0	70.58836	2
ACCGGAA	450	0.0	69.58099	3
GTTCGGA	275	0.0	69.01039	2
TCGGGAA	740	0.0	67.95687	3
AATCGGA	505	0.0	67.643845	2
ATCGGGA	3340	0.0	64.63267	2
AAGCGTC	295	0.0	64.30279	9