C68Y0ACXX_l03n02_53115004-1.3420000003588a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l03n02_53115004-1.3420000003588a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4562153
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCTTCGCCTGTGTAGATCT	22386	0.4906893740740392	Illumina Single End PCR Primer 1 (96% over 32bp)
GTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC	9181	0.20124270273267908	No Hit
TGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG	8610	0.1887266823361689	No Hit
TTGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCA	7097	0.15556251620671205	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	5981	0.13110038177150132	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	5663	0.12412998862598426	No Hit
TTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGA	4691	0.10282425863402651	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCGGGA	10410	90.52699	2
GAGCGGC	6850	90.04713	9
CGGGAGA	9090	87.94963	4
AGAGCGG	7335	87.19567	8
GAGAGCG	8130	85.084	7
TCGGGAG	9535	83.79528	3
AAGCGGC	2115	82.04533	9
ATTCGGA	885	81.45753	2
ATCCGGA	1285	80.46079	2
GATCGGG	12190	79.41433	1
TCGGAGA	1340	78.55765	4
GAACCGG	810	77.880035	1
CGGAAAG	2575	77.34146	5
AATCGGA	1525	76.81712	2
GATCCGG	1440	74.769226	1
TCGGGAA	3045	74.43564	3
AGAGCGT	19990	73.358475	8
GGATCGG	1690	73.25096	1
GAGCGTC	19940	72.876656	9
CGGAGAG	2760	72.50095	5