C68Y0ACXX_l03n02_34098-1.34200000035704.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l03n02_34098-1.34200000035704.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2286754
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCTTCGCCTGTGTAGATCT	6711	0.2934727565798507	Illumina Single End PCR Primer 1 (96% over 32bp)
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	3517	0.1537987907750462	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	3184	0.13923666472213453	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	3148	0.13766238082452245	No Hit
TGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG	2778	0.12148224076573169	No Hit
GTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC	2722	0.11903335470277956	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	2571	0.11243010835446227	No Hit
TGTGTTTGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGT	2562	0.11203653738005924	No Hit
GTGTTTGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTT	2424	0.10600178243921296	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGGC	1655	87.35182	9
CGGGAGA	2405	85.14473	4
AGAGCGG	1830	81.588615	8
TCGGGAG	2575	78.97128	3
AAGCGGC	645	78.63107	9
GAGAGCG	2340	76.9729	7
GTTCGGA	250	75.85019	2
TCGGGAA	765	73.73517	3
CGGAAAG	765	73.11555	5
ATTCGGA	375	70.79351	2
TCGGAGA	470	70.597496	4
GATCCGG	445	69.25132	1
ATCGGGA	3565	67.95135	2
AATCGGA	475	66.867935	2
GGATCGG	655	66.59188	1
GAACCGG	300	66.37473	1
GATCGGG	3850	65.512726	1
AACCGGA	330	63.208492	2
GAATCGG	565	62.095196	1
ACCGGAA	245	61.911736	3