C68Y0ACXX_l03n01_40255-1.341000000357f8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l03n01_40255-1.341000000357f8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7531203
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTAT	192069	2.550309691559237	TruSeq Adapter, Index 7 (97% over 38bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14881	0.1975912745945103	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	11923	0.1583146809347723	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	10168	0.1350116309439541	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	9398	0.1247875007485524	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	9392	0.12470783220157523	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	33605	64.160736	4
TCGGAAG	33850	64.09004	3
GATCGGA	34625	62.804684	1
GAAGAGC	34670	62.157486	6
ATCGGAA	35240	61.467747	2
GGAAGAG	39195	55.19958	5
GCCGTCT	24630	43.330765	50-51
ATGCCGT	24575	43.161324	48-49
TGCCGTC	24645	43.073074	50-51
TATGCCG	24760	43.0019	48-49
TCGTATG	25040	42.853256	44-45
CGTATGC	24995	42.63009	46-47
CATCTCG	24635	42.499897	40-41
CTCGTAT	24850	42.435585	44-45
TCTCGTA	24895	42.415966	42-43
ATCTCGT	24715	42.244507	42-43
CGTCTTC	25440	42.092163	52-53
GTATGCC	25755	41.602634	46-47
GTCACGA	25830	40.777435	28-29
TCACGAG	25860	40.491673	30-31