C68Y0ACXX_l02n02_30423-1.34200000035748.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l02n02_30423-1.34200000035748.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2641641
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	29931	1.1330457090876467	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	23446	0.8875543648815263	No Hit
GTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTC	11636	0.4404837750474042	No Hit
TGTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTT	11566	0.43783390702975916	No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGATAGGGTGTAGATCT	11437	0.4329505788258132	Illumina Single End PCR Primer 1 (97% over 34bp)
TTGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACT	11405	0.4317392105891754	No Hit
TTGTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGT	5799	0.21952263763319846	No Hit
GTGTTTGAGGGGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTC	5021	0.190071247379943	No Hit
TGTGTTTGAGGGGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTT	4772	0.18064528828860546	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	3513	0.13298551922838872	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	3305	0.12511162569024328	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCGGGA	5770	88.44035	2
GAGCGGC	3390	88.40102	9
CGGGAGA	4805	88.23348	4
AGAGCGG	3660	85.37604	8
ATTCGGA	790	83.44527	2
TCGGGAG	5250	83.19354	3
TCGGAGA	1050	79.94167	4
GTTCGGA	540	79.921135	2
CGGAGAG	1640	79.80948	5
AAGCGGC	1045	79.407524	9
ATCCGGA	840	78.47828	2
TCGGGAA	1410	75.33871	3
AAGGGGC	2290	72.265305	9
AAGCGTC	420	72.25544	9
GAGAGCG	5240	72.121864	7
TTGGGAG	2475	69.937	3
CCGGAGA	900	69.55378	4
CGGAAAG	1595	69.276276	5
GATCCGG	1025	68.019295	1
TCCGGAG	780	67.48662	3