C68Y0ACXX_l02n01_35008-1.341000000357b4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l02n01_35008-1.341000000357b4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2404685
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTCATTATCTCGTAT	34755	1.445303646839399	TruSeq Adapter, Index 2 (97% over 37bp)
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	5141	0.21379099549421235	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	4032	0.16767268893846804	No Hit
TTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGA	3915	0.16280718680409284	No Hit
GTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC	3801	0.15806644113470164	No Hit
TTGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCA	3224	0.13407161436944964	No Hit
GTGTTTGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTTAGTTCAA	3213	0.13361417399784173	No Hit
TGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG	2998	0.12467329400732322	No Hit
TTGTGTTTGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTTAGTTC	2782	0.1156908285284767	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTCGTC	15	6.6247425E-4	94.9786	8
TCGGAAG	5320	0.0	69.90514	3
CGGAAGA	5325	0.0	69.75031	4
GATCGGA	5530	0.0	67.351364	1
ATCGGAA	5570	0.0	66.76757	2
GAAGAGC	5650	0.0	65.56045	6
GGAAGAG	6475	0.0	57.500557	5
ACGGCGC	45	1.5037876E-5	52.852707	1
TTGTGTT	26655	0.0	48.415104	1
AACGCGG	40	5.351796E-4	47.567436	1
GCCGTCT	4285	0.0	43.457676	50-51
TGTACCG	55	4.9672708E-5	43.17838	2
CGTCTTC	4275	0.0	43.170856	52-53
TCGTATG	4320	0.0	42.765026	44-45
TCTCGTA	4300	0.0	42.743927	42-43
CGTATGC	4295	0.0	42.740177	46-47
ATGCCGT	4330	0.0	42.7291	48-49
TATGCCG	4305	0.0	42.701385	48-49
TGCCGTC	4330	0.0	42.67691	50-51
CTCGTAT	4290	0.0	42.676613	44-45