C68Y0ACXX_l01n02_34302-1.342000000358e7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l01n02_34302-1.342000000358e7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8114130
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	16469	0.2029669231328559	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	15581	0.1920230511465801	No Hit
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	12661	0.15603644506558312	No Hit
TTGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGA	12597	0.15524769753504072	No Hit
GTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC	11488	0.14158018173236073	No Hit
TGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG	10638	0.13110462859234445	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	9730	0.11991427300277416	No Hit
TTGTGTTTGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCA	9294	0.11454093045095409	No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCTTCGCCTGTGTAGATCT	8664	0.10677669694717734	Illumina Single End PCR Primer 1 (96% over 32bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGGC	5830	84.7548	9
CGGGAGA	7825	81.832756	4
AGAGCGG	6380	81.01753	8
AAGCGGC	1940	78.21921	9
CGGAAAG	3245	76.88628	5
GAGAGCG	7090	76.319244	7
TCGGGAG	8310	72.43332	3
ATTCGGA	940	72.16092	2
TCGGGAA	2660	68.474266	3
GTTCGGA	1005	67.49379	2
ACCGGAA	1115	66.788635	3
TCGGAGA	1985	66.19071	4
GAACCGG	1105	66.112236	1
AACCGGA	1050	64.149445	2
CGGAGAG	3860	63.407436	5
GATCCGG	1550	62.128048	1
GGATCGG	2955	61.644897	1
ATCGGGA	11625	60.797707	2
AAGCGTC	940	60.032196	9
GATCGGG	12220	59.976437	1