C68Y0ACXX_l01n02_30423-1.34200000035748.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C68Y0ACXX_l01n02_30423-1.34200000035748.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2596973
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTA	29795	1.1472972572298596	No Hit
GTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTAC	23263	0.8957736564839142	No Hit
TGTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTT	11631	0.44786757505757663	No Hit
GTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTC	11540	0.44436349550033827	No Hit
TTGTGTTTGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACT	10898	0.4196424067558654	No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGATAGGGTGTAGATCT	6595	0.25394950197787963	Illumina Single End PCR Primer 1 (97% over 34bp)
TTGTGTTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGT	5677	0.21860065545540905	No Hit
GTGTTTGAGGGGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTC	5054	0.19461118771739253	No Hit
TGTGTTTGAGGGGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTT	4786	0.18429148088948172	No Hit
GTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGC	3491	0.13442573334416646	No Hit
TGTGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAG	3269	0.12587731947925526	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGGC	2820	86.412926	9
ATCGGGA	4455	85.90623	2
CGGGAGA	3935	83.99985	4
AAGCGGC	880	80.81153	9
AGAGCGG	3205	80.02961	8
TCGGGAG	4305	79.64446	3
TCGGAGA	1155	78.422714	4
ATTCGGA	720	78.381454	2
CGGAGAG	1895	76.32751	5
ATCCGGA	850	75.87852	2
GTTCGGA	600	75.87852	2
TTGGGAG	2400	72.9131	3
GTCCGGA	365	72.760216	2
CCGGAGA	955	71.50717	4
AAGCGTC	380	71.11414	9
CGGAAAG	1665	70.63629	5
AAGGGGC	2435	67.95027	9
AATCGGA	615	67.85884	2
GAGAGCG	4480	65.828	7
GATCCGG	1040	64.757095	1