C6001ACXX l02n01 n_120_2.3410000000d985.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C6001ACXX l02n01 n_120_2.3410000000d985.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	575509
Sequences flagged as poor quality	0
Sequence length	51
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCAGTTCAAGGTCACCGTGCAGCCGTACGCCGCCGGCGCCGGCAGGTTCG	1121	0.19478409547027065	No Hit
CCGGGGTGGAGCACGTCGGCGGCGACATGTTCGCCTCCGTGCCCCGCGGCG	954	0.16576630426283515	No Hit
GCGGCGGCTACGGAGGAGGTGGCGGCGGCGGCTACGGGCGCCGTGAGGGCG	882	0.15325563979016837	No Hit
GCCGTTGCGGCGCAGCGCCCCGAGGGGCGCGCCAGAGGCGCGCGGTGACCG	751	0.13049318081906625	No Hit
CTGAAGCGTGGGTACGTGGCCTCCAACTCCAAGGATGACCCTGCCAAGGAG	746	0.12962438467513107	No Hit
GGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGCCGTATGCGGAACG	670	0.11641868328731611	No Hit
CGCTCATGCAGAAGCTCCGCGCCGTGCTCGTCGAGCACGCCCTCACCAGCG	659	0.11450733177065867	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTAATT	80	0.0	39.37158	2
GTTAGAG	30	1.1392136E-4	37.499996	15
CGTTTAG	55	2.741217E-9	36.82138	45
CTACGGA	115	0.0	35.214333	8
AACGATT	45	8.695806E-7	34.99696	2
GGACTAT	65	3.6743586E-10	34.612377	35
AGCCGTA	235	0.0	34.47108	22
CGTCTCA	145	0.0	34.134964	3
CCGTTTA	60	6.4155756E-9	33.752934	44
GTGGGTA	195	0.0	33.45863	8
AAGCGTG	210	0.0	33.211403	4
GGGTAAT	95	0.0	33.204056	1
CCGTATG	135	0.0	31.663916	38
CTTACCG	50	1.979346E-6	31.500002	42
GAAGCGT	200	0.0	31.497265	3
ATTTGCG	100	0.0	31.497265	6
AGGGCTA	65	1.39971235E-8	31.156555	43
GGTACGT	210	0.0	31.06873	11
TATGCGG	140	0.0	30.53306	41
ATGACCC	215	0.0	30.3462	35