C6001ACXX l02n01 k_120_3.3410000000d886.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C6001ACXX l02n01 k_120_3.3410000000d886.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	560182
Sequences flagged as poor quality	0
Sequence length	51
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGAGATCGAGGCCGCCCGCGTCGCCGTCGCCAACGGCACCGCCCCCGTCG	2060	0.36773762812800126	No Hit
CCTGAAGATACCTACATTCTCGAGGCCGCTGAAACTGCCGGGGTGGAGCTG	926	0.16530341924588793	No Hit
GTTTTGTTTCCTCGCTGCTCAGCATTGTGATTCTTAACCTGCCCCCCGCTG	892	0.1592339632476588	No Hit
CCCTTCTCCACACTCTTTGCTCGCAGAAGGTTCATCCCCTGCGCGTAGCTG	764	0.1363842465484432	No Hit
GCCGGGTTGGCGGTTGGTTCCGCGGTTTGCATTACGTCCATCTTCGCAGGG	687	0.12263871384657128	No Hit
GGGAAGTAGAACACAATGCTGTAAAGCCAGATAACGCCAGCCCAGCCCCAG	676	0.12067506631773246	No Hit
CCCAACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAG	613	0.10942872137983727	No Hit
CTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGG	602	0.10746507385099842	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCCCGT	250	0.0	37.800976	43
CGCGCTA	55	2.741217E-9	36.82242	44
GCGCTAG	60	6.4119376E-9	33.753883	45
CCCGCGT	290	0.0	33.36293	16
CATTACG	95	0.0	33.155792	30
ACGGCAC	305	0.0	32.456955	34
TAACGCC	70	8.1308826E-10	32.140816	32
GTATGCG	75	1.6989361E-9	30.000774	25
TAGCGGG	60	2.4146902E-7	30.000772	16
AACGATC	90	1.2732926E-11	29.998098	9
TTACGTC	105	0.0	29.998096	32
TCTTAAC	150	0.0	29.998095	32
CCCGAGT	75	1.7007551E-9	29.998095	37
AACGGCA	330	0.0	29.316322	33
TAACGCT	70	2.8823706E-8	28.926733	8
ACTCTAA	125	0.0	28.798172	9
CGCGTAG	125	0.0	28.798172	42
CCAACGG	340	0.0	27.792355	31
GTCACGT	65	4.8685797E-7	27.69055	6
CCCACTA	115	0.0	27.392012	22