C5WCJACXX l06n01 bgm6.3410000000bfd5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C5WCJACXX l06n01 bgm6.3410000000bfd5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	52494545
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	1319015	2.512670602250196	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCTGA	143850	43.561626	16
ACACGTC	144265	43.548023	13
ATCGGAA	146585	43.506737	2
GATCGGA	146815	43.46864	1
ACGTCTG	144780	43.31755	15
CGATGTA	142565	43.247963	34
ACCGATG	143105	43.21841	32
CACCGAT	143105	43.212704	31
TCGGAAG	147400	43.2036	3
TCTCGTA	142600	43.103558	41
CCGATGT	143290	43.074677	33
TATCTCG	143030	43.0707	39
CGGAAGA	147475	43.051876	4
CTCGTAT	142815	43.03552	42
CGTATGC	143330	42.94526	44
TCGTATG	143395	42.938343	43
GTCACCG	144245	42.900814	29
CACGTCT	146550	42.83832	14
ATCTCGT	143720	42.83458	40
TCACCGA	144815	42.671368	30