C5WCJACXX l02n01 ap2_mchx_mn_pd_18.3410000000c307.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C5WCJACXX l02n01 ap2_mchx_mn_pd_18.3410000000c307.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10914895
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	30588	0.2802409001644084	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	24555	0.22496780775261696	TruSeq Adapter, Index 6 (100% over 51bp)
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	23567	0.21591595704768574	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	21667	0.198508551845895	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	16523	0.15138029271009937	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	14237	0.13043643571468164	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	14197	0.1300699640262229	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	11746	0.10761441131591279	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	3200	33.819004	11
CGTATGC	3235	32.343586	44
ACGTCTG	3350	31.90175	15
GTATGCC	3325	31.467255	45
CACACGT	3535	30.48666	12
CACGCCA	3460	30.367182	31
AGTCACG	3475	30.365591	28
TCGTATG	3505	30.044662	43
AGCACAC	3625	29.978151	10
ACACGTC	3660	29.383974	13
GTCACGC	3620	29.211445	29
TCACGCC	3635	29.090902	30
CGCCAAT	3645	29.011091	33
CTCGTAT	3670	28.508118	42
CACGTCT	3805	28.205088	14
TATCTCG	3715	28.162796	39
GCCAATA	3890	26.952562	34
ACGCCAA	3985	26.479406	32
TCTCGTA	4115	25.370544	41
CGTCTGA	4265	25.110403	16