SE372_GTGGCC_L006_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE372_GTGGCC_L006_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7062941
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGGCCATCTCGTATGCC	191958	2.7178196731361624	TruSeq Adapter, Index 20 (98% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	22560	43.268616	12
GCACACG	22670	43.08874	11
ACACGTC	22710	42.981915	13
AGTCACG	22375	42.736057	28
TCACGTG	22060	42.718487	30
GTATGCC	21850	42.7159	45
GTCACGT	22215	42.600033	29
ACGTCTG	23000	42.43997	15
GTGGCCA	21835	42.396393	34
CACGTCT	23070	42.301445	14
CGTGGCC	21995	42.261597	33
AGCACAC	23185	42.238365	10
CGTATGC	22065	42.18748	44
CGTCTGA	23320	41.886543	16
CAGTCAC	22990	41.857075	27
TCGTATG	22300	41.833736	43
CACGTGG	22510	41.733955	31
CTCGTAT	22350	41.658703	42
TGGCCAT	22290	41.61172	35
AGAGCAC	23700	41.453712	8