SE369_GTAGAG_L006_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE369_GTAGAG_L006_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15654450
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATCTCGTATGCC	649094	4.146386490742248	TruSeq Adapter, Index 3 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	75675	42.917805	12
ACACGTC	75690	42.911995	13
GCACACG	75750	42.899208	11
GTATGCC	73465	42.823105	45
CACGTCT	76020	42.672176	14
CGTAGAG	73970	42.477146	33
AGTCACG	75230	42.473545	28
ACGTCTG	76375	42.459103	15
GTCACGT	75015	42.31811	29
AGCACAC	77035	42.25078	10
TCACGTA	74875	42.250225	30
CGTCTGA	76660	42.24256	16
GATCGGA	76375	42.20723	1
CACGTAG	75100	42.126774	31
CGTATGC	74500	42.11337	44
CTCGTAT	74565	42.080948	42
CAGTCAC	76165	42.013912	27
TCGTATG	74955	41.9328	43
TCGGAAG	78245	41.905113	3
AGAGCAC	78010	41.84095	8