SE367_ATGTCA_L006_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE367_ATGTCA_L006_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5814279
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTATG	391270	6.7294672305886944	TruSeq Adapter, Index 15 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGTCTG	45240	43.709526	15
ACACGTC	45305	43.626953	13
TCGTATG	44705	43.606716	45
GCACACG	45330	43.583412	11
CACACGT	45315	43.572643	12
CACGTCT	45345	43.504128	14
CGTCTGA	45530	43.425804	16
GATCGGA	45655	43.309002	1
AGCACAC	45830	43.240456	10
TCGGAAG	46570	43.168343	3
CAGTCAC	45320	43.127026	27
CGGAAGA	46835	43.09036	4
AGAGCAC	46445	42.977886	8
CTCGTAT	45135	42.97684	44
ACTCCAG	45370	42.969654	23
CCAGTCA	45330	42.898746	26
TCCAGTC	45425	42.83875	25
CTGAACT	46165	42.80559	19
GAACTCC	45815	42.790348	21
AGTCACA	45755	42.73741	28