SE364_ACTTGA_L006_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE364_ACTTGA_L006_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16729964
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATGCC	525953	3.1437784325178466	TruSeq Adapter, Index 8 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	61355	43.306038	11
ACGTCTG	61260	43.188805	15
CACACGT	61545	43.179134	12
ACACGTC	61555	43.10608	13
CACGTCT	61510	43.02058	14
GTATGCC	59785	42.92608	45
CGTCTGA	61815	42.786476	16
CGTATGC	59940	42.7212	44
GTCACAC	61050	42.427704	29
CTCGTAT	60470	42.356537	42
GAACTCC	62085	42.343067	21
GATCGGA	61985	42.304214	1
CAGTCAC	61635	42.24881	27
AGCACAC	63020	42.24041	10
TCGTATG	60780	42.20101	43
CCAGTCA	61705	42.18995	26
ACTCCAG	62140	42.144047	23
TCCAGTC	61975	42.045822	25
TCGGAAG	63920	41.696777	3
AGTCACA	62335	41.66622	28