SE355_GAGTGG_L005_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE355_GAGTGG_L005_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8034675
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATCTCGTATGCC	189373	2.356946609539278	TruSeq Adapter, Index 7 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	21705	43.07127	1
TCGGAAG	21795	42.979366	3
GCACACG	21810	42.526386	11
CGGAAGA	21995	42.505943	4
ACACGTC	21835	42.457085	13
CACGTCT	21835	42.42644	14
CGTCTGA	21825	42.362896	16
CGAGTGG	21260	42.289513	33
CACGAGT	21355	42.277645	31
ACGTCTG	21925	42.231766	15
ACGAGTG	21430	42.182453	32
AGTCACG	21730	42.016052	28
ATCGGAA	22295	41.97826	2
GTCACGA	21785	41.925262	29
GAACTCC	22005	41.89578	21
TCACGAG	21765	41.893764	30
AGAGCAC	22200	41.839577	8
GGATCTC	21585	41.658268	38
GTGGATC	21430	41.595173	36
CACACGT	22320	41.584915	12