MK246_TAGCTT_L003_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MK246_TAGCTT_L003_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17700647
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGCC	121780	0.6879974500367134	TruSeq Adapter, Index 10 (100% over 51bp)

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGCTTA	15080	42.817642	34
ACTAGCT	15575	41.55445	32
CACTAGC	15840	40.81421	31
TCACTAG	16125	40.240696	30
GTCACTA	16150	40.231304	29
TATCTCG	16780	38.8787	39
CTAGCTT	16775	38.63715	33
GCACACG	17440	38.28095	11
CACACGT	17560	37.86638	12
CGTCTGA	17575	37.731567	16
CGTATGC	17310	37.69001	44
CTTATCT	17255	37.625854	37
GTATGCC	17370	37.53273	45
AGCTTAT	17295	37.408714	35
AGTCACT	17630	37.146324	28
ACGTCTG	18075	36.812263	15
TTATCTC	18015	36.250885	38
CACGTCT	18635	35.645664	14
CTCGTAT	18505	35.437317	42
GTCTGAA	18810	35.385784	17