lane2_Undetermined_L002_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	lane2_Undetermined_L002_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4506497
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	36914	0.8191284716266315	No Hit
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	9354	0.20756698606478602	No Hit
TCTTCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	8507	0.18877189977048692	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATTCGT	3905	43.14141	1
GATCGGA	4360	43.133408	1
ATCGGAA	4335	43.01848	2
AATTCGG	4905	42.660763	23
TTCGGTA	4900	42.61009	25
GAATTCG	4905	42.569016	22
TCGGAAG	4365	42.516426	3
ACACGTC	3860	42.19713	13
TCGGGGA	4965	42.050392	17
ATTCGGT	4980	42.017345	24
CGGTCTC	5015	41.764797	40
CGGAAGA	4440	41.290066	4
CGTCTGA	3845	41.133022	16
ACGTCTG	3900	40.899055	15
CAGGCGG	5135	40.83261	36
CCAGGCG	5140	40.70535	35
TCGTTGG	4150	40.702145	4
AGCCGAT	975	40.61288	18
CTCGGGG	4155	40.50067	16
TCCTCGG	4175	40.198887	14