SE311_GGTAGC_L005_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE311_GGTAGC_L005_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11789772
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTAGCATCTCGTATGCC	630568	5.348432522698488	TruSeq Adapter, Index 22 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	73150	43.542873	11
ACGTCTG	72890	43.52552	15
CACGTCT	72935	43.507736	14
ACACGTC	73135	43.468742	13
CACACGT	73260	43.428352	12
GTCACGG	71805	43.387157	29
CACGGTA	70825	43.3744	31
GGTAGCA	69690	43.27371	34
CGGTAGC	69795	43.266632	33
GTAGCAT	69740	43.226555	35
AGTCACG	72405	43.17988	28
CGTCTGA	72800	43.170673	16
GTATGCC	71435	43.120552	45
TCACGGT	71515	43.091187	30
AGCACAC	74290	42.962524	10
GATCGGA	74210	42.92729	1
TAGCATC	70120	42.879997	36
CGTATGC	71860	42.871784	44
CAGTCAC	73275	42.84529	27
GAACTCC	73230	42.788326	21