SE307_GTGGCC_L005_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SE307_GTGGCC_L005_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11041038
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGGCCATCTCGTATGCC	566551	5.131320080593872	TruSeq Adapter, Index 20 (98% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	64950	43.48734	11
ACGTCTG	64910	43.434418	15
ACACGTC	65015	43.40926	13
CACACGT	65075	43.396893	12
CGTCTGA	65100	43.278706	16
CACGTCT	65200	43.25503	14
AGTCACG	64225	43.172527	28
CGTGGCC	62365	43.096447	33
GTCACGT	63580	43.033695	29
GATCGGA	65775	43.030872	1
GTATGCC	64075	43.013756	45
GTGGCCA	62425	42.961315	34
GGCCATC	62910	42.941254	36
TGGCCAT	62460	42.93004	35
AGCACAC	66030	42.874866	10
GAACTCC	65560	42.744373	21
CGTATGC	64465	42.736076	44
CTCGTAT	64520	42.73452	42
TCGGAAG	66690	42.723587	3
CCAGTCA	65205	42.720337	26