Flowcell: C5HHJACXX

Barcode lane statistics

Lane Sample ID Sample Ref Index Description Control Project Yield (Mbases) % PF # Reads % of raw clusters per lane % Perfect Index Reads % One Mismatch Reads (Index) % of >= Q30 Bases (PF) Mean Quality Score (PF)
2 bgm1 CGATGT N lane_2 1,703 100.00 33,393,557 20.76 99.07 0.93 97.69 37.90
2 bgm2 TGACCA N lane_2 1,437 100.00 28,168,105 17.51 98.71 1.29 97.67 37.89
2 bgm3 ACAGTG N lane_2 1,492 100.00 29,254,740 18.19 99.10 0.90 97.63 37.88
2 bgm4 GCCAAT N lane_2 1,488 100.00 29,183,423 18.15 98.84 1.16 96.66 37.59
2 bgm5 CAGATC N lane_2 1,852 100.00 36,322,984 22.58 99.07 0.93 97.61 37.87
2 lane2 unknown Undetermined Clusters with unmatched barcodes for lane 2 N Undetermined_indices 230 100.00 4,506,497 2.80 0.00 0.00 97.59 37.88
3 SV69 CGATGT N lane_3 2,391 100.00 46,876,120 24.72 98.88 1.12 97.09 37.68
3 SV70 TGACCA N lane_3 2,179 100.00 42,732,772 22.53 98.76 1.24 97.06 37.67
3 SV71 ACAGTG N lane_3 1,820 100.00 35,681,283 18.82 99.14 0.86 97.06 37.67
3 SV72 GCCAAT N lane_3 3,028 100.00 59,371,772 31.31 98.84 1.16 97.08 37.68
3 lane3 unknown Undetermined Clusters with unmatched barcodes for lane 3 N Undetermined_indices 253 100.00 4,967,305 2.62 0.00 0.00 97.36 37.78
4 SV73 CAGATC N lane_4 3,233 100.00 63,390,792 32.11 99.14 0.86 96.87 37.60
4 SV74 CTTGTA N lane_4 3,410 100.00 66,865,529 33.87 99.13 0.87 96.89 37.61
4 SV75 CGATGT N lane_4 3,144 100.00 61,647,926 31.22 98.97 1.03 96.91 37.62
4 lane4 unknown Undetermined Clusters with unmatched barcodes for lane 4 N Undetermined_indices 283 100.00 5,541,311 2.81 0.00 0.00 97.26 37.71
5 SE297 CAGATC N lane_5 871 100.00 17,087,498 8.34 98.96 1.04 96.25 37.42
5 SE298 ACTTGA N lane_5 903 100.00 17,713,599 8.64 98.75 1.25 95.90 37.31
5 SE299 GATCAG N lane_5 836 100.00 16,383,933 7.99 98.62 1.38 95.26 37.07
5 SE300 TAGCTT N lane_5 744 100.00 14,586,632 7.12 98.94 1.06 95.94 37.31
5 SE301 GGCTAC N lane_5 597 100.00 11,703,694 5.71 98.11 1.89 95.56 37.18
5 SE302 CTTGTA N lane_5 859 100.00 16,845,466 8.22 98.78 1.22 94.80 36.91
5 SE303 TGACCA N lane_5 965 100.00 18,916,355 9.23 98.02 1.98 96.37 37.47
5 SE304 ACAGTG N lane_5 515 100.00 10,096,620 4.93 98.48 1.52 96.38 37.47
5 SE305 GCCAAT N lane_5 465 100.00 9,110,181 4.44 97.92 2.08 96.24 37.43
5 SE306 GTGAAA N lane_5 554 100.00 10,867,984 5.30 98.78 1.22 95.97 37.33
5 SE307 GTGGCC N lane_5 563 100.00 11,041,038 5.39 98.46 1.54 95.97 37.32
5 SE308 GTTTCG N lane_5 457 100.00 8,967,527 4.37 98.97 1.03 95.90 37.31
5 SE309 CGTACG N lane_5 590 100.00 11,577,167 5.65 98.67 1.33 95.95 37.32
5 SE310 GAGTGG N lane_5 701 100.00 13,742,886 6.70 98.00 2.00 96.28 37.43
5 SE311 GGTAGC N lane_5 601 100.00 11,789,772 5.75 98.42 1.58 96.05 37.36
5 lane5 unknown Undetermined Clusters with unmatched barcodes for lane 5 N Undetermined_indices 232 100.00 4,552,623 2.22 0.00 0.00 95.83 37.31
6 SE312 CAGATC N lane_6 492 100.00 9,655,560 4.86 98.63 1.37 96.52 37.53
6 SE313 ACTTGA N lane_6 678 100.00 13,302,291 6.69 98.85 1.15 95.60 37.19
6 SE314 ATGTCA N lane_6 775 100.00 15,198,859 7.65 98.56 1.44 96.66 37.57
6 SE315 CCGTCC N lane_6 1,043 100.00 20,453,829 10.29 98.06 1.94 95.92 37.33
6 SE316 GTAGAG N lane_6 596 100.00 11,686,474 5.88 98.80 1.20 96.62 37.56
6 SE317 GTCCGC N lane_6 1,569 100.00 30,756,691 15.47 96.97 3.03 96.47 37.51
6 SE318 GTGAAA N lane_6 790 100.00 15,486,341 7.79 98.68 1.32 96.50 37.52
6 SE320 GATCAG N lane_6 600 100.00 11,761,302 5.92 98.63 1.37 95.94 37.33
6 SE321 TAGCTT N lane_6 513 100.00 10,055,684 5.06 98.81 1.19 95.43 37.13
6 SE322 GGCTAC N lane_6 430 100.00 8,423,835 4.24 98.08 1.92 94.90 36.92
6 SE323 CTTGTA N lane_6 459 100.00 9,007,119 4.53 98.77 1.23 95.73 37.25
6 SE324 GTGGCC N lane_6 1,047 100.00 20,538,926 10.33 98.48 1.52 96.35 37.47
6 SE325 CGTACG N lane_6 631 100.00 12,367,864 6.22 98.54 1.46 96.25 37.43
6 SE326 AGTTCC N lane_6 319 100.00 6,260,078 3.15 98.34 1.66 95.82 37.27
6 lane6 unknown Undetermined Clusters with unmatched barcodes for lane 6 N Undetermined_indices 195 100.00 3,813,743 1.92 0.00 0.00 96.58 37.55
7 foxfcamras12hpf1 GGACCC N lane_7 476 100.00 9,342,071 16.57 96.16 3.84 99.06 38.28
7 foxfcamras12hpf2 CCTCGG N lane_7 481 100.00 9,432,510 16.73 98.59 1.41 99.06 38.29
7 foxflaz12hpf1 AAGGGA N lane_7 407 100.00 7,983,433 14.16 97.96 2.04 99.08 38.29
7 foxflaz12hpf2 TTCAGC N lane_7 452 100.00 8,871,429 15.73 98.91 1.09 99.09 38.30
7 foxfnk412hpf1 CCTTCA N lane_7 493 100.00 9,672,301 17.16 98.88 1.12 99.09 38.32
7 foxfnk412hpf2 AAGACG N lane_7 436 100.00 8,543,274 15.15 98.32 1.68 99.11 38.34
7 lane7 unknown Undetermined Clusters with unmatched barcodes for lane 7 N Undetermined_indices 129 100.00 2,536,196 4.50 0.00 0.00 98.91 38.33
8 NLP7_mCHX_pN_mD_1 ATCACG N lane_8 1,727 100.00 33,864,419 17.88 99.50 0.50 96.77 37.53
8 NLP7_mCHX_pN_mD_2 CGATGT N lane_8 153 100.00 2,994,309 1.58 99.06 0.94 96.46 37.48
8 NLP7_mCHX_pN_mD_3 TTAGGC N lane_8 967 100.00 18,956,820 10.01 99.52 0.48 96.61 37.49
8 NLP7_mCHX_pN_pD_4 TGACCA N lane_8 819 100.00 16,058,667 8.48 99.17 0.83 96.76 37.52
8 NLP7_mCHX_pN_pD_5 ACAGTG N lane_8 702 100.00 13,760,574 7.26 99.49 0.51 96.81 37.55
8 NLP7_mCHX_pN_pD_6 GCCAAT N lane_8 610 100.00 11,966,472 6.32 99.27 0.73 96.66 37.50
8 NLP7_pCHX_pN_mD_7 CAGATC N lane_8 867 100.00 16,993,955 8.97 99.30 0.70 96.81 37.57
8 NLP7_pCHX_pN_mD_8 ACTTGA N lane_8 912 100.00 17,888,747 9.44 99.49 0.51 96.81 37.57
8 NLP7_pCHX_pN_mD_9 GATCAG N lane_8 585 100.00 11,461,507 6.05 99.47 0.53 96.74 37.54
8 NLP7_pCHX_pN_pD_10 TAGCTT N lane_8 644 100.00 12,634,289 6.67 99.37 0.63 96.69 37.51
8 NLP7_pCHX_pN_pD_11 GGCTAC N lane_8 792 100.00 15,527,537 8.20 99.33 0.67 96.75 37.53
8 NLP7_pCHX_pN_pD_12 CTTGTA N lane_8 767 100.00 15,042,252 7.94 99.47 0.53 96.74 37.54
8 lane8 unknown Undetermined Clusters with unmatched barcodes for lane 8 N Undetermined_indices 116 100.00 2,276,776 1.20 0.00 0.00 96.92 37.64

Sample information

Sample

ID		 Recipe Operator Directory
bgm1 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_2/Sample_bgm1
bgm2 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_2/Sample_bgm2
bgm3 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_2/Sample_bgm3
bgm4 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_2/Sample_bgm4
bgm5 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_2/Sample_bgm5
lane2 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane2
SV69 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_3/Sample_SV69
SV70 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_3/Sample_SV70
SV71 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_3/Sample_SV71
SV72 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_3/Sample_SV72
lane3 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane3
SV73 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_4/Sample_SV73
SV74 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_4/Sample_SV74
SV75 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_4/Sample_SV75
lane4 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane4
SE297 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE297
SE298 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE298
SE299 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE299
SE300 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE300
SE301 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE301
SE302 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE302
SE303 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE303
SE304 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE304
SE305 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE305
SE306 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE306
SE307 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE307
SE308 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE308
SE309 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE309
SE310 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE310
SE311 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_5/Sample_SE311
lane5 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane5
SE312 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE312
SE313 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE313
SE314 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE314
SE315 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE315
SE316 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE316
SE317 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE317
SE318 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE318
SE320 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE320
SE321 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE321
SE322 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE322
SE323 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE323
SE324 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE324
SE325 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE325
SE326 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_6/Sample_SE326
lane6 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane6
foxfcamras12hpf1 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_7/Sample_foxfcamras12hpf1
foxfcamras12hpf2 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_7/Sample_foxfcamras12hpf2
foxflaz12hpf1 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_7/Sample_foxflaz12hpf1
foxflaz12hpf2 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_7/Sample_foxflaz12hpf2
foxfnk412hpf1 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_7/Sample_foxfnk412hpf1
foxfnk412hpf2 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_7/Sample_foxfnk412hpf2
lane7 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane7
NLP7_mCHX_pN_mD_1 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_mCHX_pN_mD_1
NLP7_mCHX_pN_mD_2 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_mCHX_pN_mD_2
NLP7_mCHX_pN_mD_3 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_mCHX_pN_mD_3
NLP7_mCHX_pN_pD_4 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_mCHX_pN_pD_4
NLP7_mCHX_pN_pD_5 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_mCHX_pN_pD_5
NLP7_mCHX_pN_pD_6 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_mCHX_pN_pD_6
NLP7_pCHX_pN_mD_7 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_pCHX_pN_mD_7
NLP7_pCHX_pN_mD_8 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_pCHX_pN_mD_8
NLP7_pCHX_pN_mD_9 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_pCHX_pN_mD_9
NLP7_pCHX_pN_pD_10 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_pCHX_pN_pD_10
NLP7_pCHX_pN_pD_11 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_pCHX_pN_pD_11
NLP7_pCHX_pN_pD_12 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Project_lane_8/Sample_NLP7_pCHX_pN_pD_12
lane8 /export/data1/gencore/demux/C5HHJACXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane8

bcl2fastq-1.8.4