C5726ACXX l06n01 ah8115a-042415.3410000000918a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C5726ACXX l06n01 ah8115a-042415.3410000000918a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20429511
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATG	754276	3.6920903295237952	TruSeq Adapter, Index 16 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	92720	43.780384	1
GCACACG	91315	43.69477	11
CGTCCCG	85085	43.442707	35
GTCCCGA	83890	43.274628	36
CCCGTCC	86725	43.17428	33
ACACGTC	92475	43.170143	13
ACGTCTG	92170	43.16074	15
CACGTCT	92395	43.1237	14
CACACGT	92620	43.104782	12
GAGCACA	93075	43.100117	9
AGCACAC	92875	43.09847	10
ACCCGTC	88015	42.981724	32
TCACCCG	89090	42.94878	30
AGAGCAC	93620	42.930904	8
CGTCTGA	92580	42.930725	16
CCCGATC	84550	42.923126	38
CACCCGT	88395	42.903717	31
CCGTCCC	86485	42.883488	34
TCGGAAG	94800	42.750175	3
TCCCGAT	85165	42.616783	37