C5726ACXX l06n01 ah8104a-042415.34100000009160.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C5726ACXX l06n01 ah8104a-042415.34100000009160.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25707763
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTATG	917679	3.569657149865587	TruSeq Adapter, Index 15 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	110800	43.71961	1
GCACACG	109390	43.63272	11
ACACGTC	110330	43.277035	13
CACACGT	110430	43.274174	12
ACGTCTG	110485	43.163914	15
CACGTCT	110630	43.093025	14
GAGCACA	111535	43.003338	9
CGTCTGA	110855	42.975204	16
AGCACAC	111245	42.969856	10
TCGGAAG	112755	42.872612	3
AGAGCAC	112030	42.855495	8
GAACTCC	110940	42.492252	21
ATCGGAA	114155	42.433693	2
TCCAGTC	110905	42.26799	25
CAGTCAC	111030	42.226154	27
GTCTGAA	113350	42.118717	17
TCGTATG	110340	42.056755	45
AGTCACA	111540	42.05622	28
CCAGTCA	111375	42.029022	26
ACTCCAG	111740	41.98998	23