C5726ACXX l05n01 ah7797i-042415.34100000009098.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C5726ACXX l05n01 ah7797i-042415.34100000009098.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18351385
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATG	220151	1.1996424248088087	TruSeq Adapter, Index 16 (97% over 40bp)
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAA	70413	0.38369311090143876	No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATC	56975	0.3104670301451362	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCCCG	25945	43.354706	35
GTCCCGA	25600	42.92947	36
GCACACG	27675	42.712154	11
TCACCCG	27235	42.288128	30
ACACGTC	27970	42.17321	13
ACCCGTC	27195	42.099888	32
CCCGTCC	27065	42.04584	33
ACGTCTG	28180	41.90785	15
CACCCGT	27490	41.754475	31
CACGTCT	28295	41.672787	14
CACACGT	28340	41.670223	12
GATCGGA	28720	41.62442	1
CCCGATC	26125	41.62111	38
CCGTCCC	27295	41.3978	34
AGCACAC	28600	41.362305	10
CGTCTGA	28575	41.304817	16
TCCCGAT	26630	41.151676	37
CCGATCT	26615	40.854836	39
CGATCTC	26710	40.812138	40
GAGCACA	29160	40.72125	9