MK218_CGATGT_L007_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MK218_CGATGT_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10430471
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	828025	7.938519746615469	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	95440	43.687317	45
CACGTCT	99110	43.424835	14
CTCGTAT	95910	43.409084	42
ACACGTC	99365	43.36547	13
AGTCACC	97440	43.327354	28
CACACGT	100030	43.32458	12
TCGTATG	96455	43.260265	43
GAACTCC	99415	43.20479	21
GATGTAT	96315	43.184696	35
ACGTCTG	99785	43.178432	15
CGTATGC	96445	43.169064	44
TCTCGTA	96500	43.151978	41
GTATCTC	96560	43.13802	38
CTCCAGT	99260	43.13462	24
CGTCTGA	99885	43.12845	16
GCACACG	100585	43.125786	11
ACTCCAG	99410	43.093803	23
TGTATCT	96655	43.084858	37
CAGTCAC	98845	43.064312	27
TCCAGTC	99220	43.059868	25