LW261_GGCTAC_L008_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	LW261_GGCTAC_L008_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6347799
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC	163943	2.582674719221576	TruSeq Adapter, Index 11 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	19735	43.11897	45
ACGGCTA	19630	42.96885	32
CACGGCT	19745	42.811428	31
GTCACGG	20175	42.779995	29
AGTCACG	20350	42.64429	28
TCACGGC	20115	42.314766	30
GGCTACA	19530	42.300484	34
CGGCTAC	19755	42.218296	33
GCACACG	21260	42.192112	11
CGTCTGA	21470	42.188107	16
CGTATGC	20170	42.07746	44
CACGTCT	21200	42.02499	14
ACGTCTG	21320	42.02061	15
ACACGTC	21225	41.996693	13
TCGTATG	20360	41.89515	43
CACACGT	21415	41.855213	12
GCTACAT	19965	41.83156	35
CTCGTAT	20315	41.798954	42
CAGTCAC	21230	41.798683	27
CCAGTCA	21410	41.699482	26