LW260_TAGCTT_L008_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	LW260_TAGCTT_L008_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8998757
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGCC	395502	4.39507367517536	TruSeq Adapter, Index 10 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	45755	43.443348	45
CACTAGC	45155	43.4114	31
ACTAGCT	45155	43.37933	32
TAGCTTA	45470	43.115284	34
CTAGCTT	45550	42.996544	33
CGTATGC	46170	42.979736	44
TCACTAG	45995	42.951233	30
CGTCTGA	47615	42.912003	16
ACGTCTG	47310	42.89929	15
ACACGTC	47215	42.866474	13
CAGTCAC	47060	42.8494	27
GCACACG	47500	42.798733	11
CTCGTAT	46450	42.79286	42
GCTTATC	46255	42.79025	36
CACACGT	47545	42.729836	12
CACGTCT	47345	42.6965	14
TCGTATG	46655	42.687305	43
CCAGTCA	47615	42.6193	26
CTTATCT	46595	42.53667	37
TATCTCG	46865	42.50642	39