LW247_GTCCGC_L008_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	LW247_GTCCGC_L008_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7881938
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTATG	999647	12.682756448985009	TruSeq Adapter, Index 18 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	118800	44.147392	45
ACGTCCG	119735	43.877068	32
AGTCACG	124185	43.862076	28
GTCACGT	122315	43.791306	29
TCACGTC	121455	43.784588	30
CACGTCC	120235	43.781593	31
CAGTCAC	126470	43.654663	27
CCAGTCA	126260	43.636383	26
TCCAGTC	125985	43.61733	25
CGTCCGC	119680	43.587757	33
ACTCCAG	125470	43.583492	23
GAACTCC	126220	43.559517	21
GTCCGCA	119850	43.541996	34
TCCGCAC	120000	43.53505	35
CGTCTGA	127730	43.516487	16
CTCCAGT	125645	43.480778	24
CGCACAT	120740	43.461945	37
ACACGTC	126405	43.40419	13
CACACGT	126980	43.393684	12
GCACACG	126975	43.375904	11