C55MVACXX l05n01 k19.34100000008348.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C55MVACXX l05n01 k19.34100000008348.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14533319
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCC	85729	0.5898790221283934	TruSeq Adapter, Index 9 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	42961	0.2956035025447387	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	30503	0.20988323451786892	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	28509	0.1961630375002434	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	22660	0.15591758496459066	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	20651	0.1420941768360001	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	17010	0.11704139983440809	No Hit
CCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTCCATGCGCACCTTGA	14948	0.1028533124470742	No Hit
GCCAAATGTTTGAACGATCGGGAATTGGATCCGGTACCGAGCTCGAATTCT	14872	0.10233037615151777	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	14539	0.10003908948809284	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	10350	40.143112	11
GTATGCC	10245	39.99425	45
CGTATGC	10250	39.952923	44
AGTCACG	10525	39.0085	28
GTCACGA	10485	39.005566	29
ACGTCTG	10705	38.812016	15
AGCACAC	10925	38.030315	10
CTCGTAT	10795	38.020794	42
CACACGT	11080	37.66072	12
TCGTATG	10980	37.44102	43
ACACGTC	11110	37.356556	13
CGTCTGA	11270	36.906174	16
CACGTCT	11260	36.839058	14
AGAGCAC	11755	35.421608	8
GAGCACA	11805	35.195362	9
CAGTCAC	11705	35.05821	27
TCTCGTA	11735	34.973557	41
TCACGAT	11765	34.85632	30
CGATCAG	11965	34.293007	33
CTGAACT	12245	33.8758	19