C55MVACXX l05n01 k111.34100000008361.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C55MVACXX l05n01 k111.34100000008361.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13059003
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC	72039	0.5516424186440573	TruSeq Adapter, Index 11 (100% over 51bp)
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACG	39913	0.30563588966171457	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGG	28884	0.22118074404301769	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATG	26700	0.20445664956199183	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGA	19617	0.15021820578492862	No Hit
CGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	17926	0.13726928464600244	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGAC	16406	0.12562980497056322	No Hit
GCCAAATGTTTGAACGATCGGGAATTGGATCCGGTACCGAGCTCGAATTCT	14500	0.11103451006175585	No Hit
CTTGGCGGTCTGGGTGCCCTCGTAGGGGCGGCCCTCGCCCTCGCCCTCGAT	13887	0.10634043042948992	No Hit
CCTCGATCTCGAACTCGTGGCCGTTCACGGAGCCCTCCATGCGCACCTTGA	13810	0.10575079889329989	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTGG	13759	0.10536026371997924	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	8770	40.42422	11
GTATGCC	8580	39.731667	45
CGTATGC	8680	39.326077	44
ACGTCTG	9175	38.541904	15
AGCACAC	9265	38.28876	10
AGTCACG	9130	38.063416	28
CACACGT	9330	37.97379	12
CGGCTAC	9105	37.726585	33
ACACGTC	9370	37.715652	13
ACGGCTA	9185	37.620575	32
CACGGCT	9200	37.549732	31
CTCGTAT	9090	37.480473	42
TCGTATG	9240	36.992657	43
GGCTACA	9270	36.93445	34
CACGTCT	9585	36.799393	14
CGTCTGA	9825	36.106403	16
GCTACAT	9520	35.964947	35
GAGCACA	10025	35.52071	9
AGAGCAC	10070	35.45119	8
CATCTCG	9655	35.400845	39