C55MVACXX l01n01 se392.34100000008106.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C55MVACXX l01n01 se392.34100000008106.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8971302
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTATG	255955	2.8530418438706	TruSeq Adapter, Index 14 (97% over 44bp)
CCTAAGTGACTTCGTTTCAGACAAACCTCCACAATGTTACGCGCAATTTAA	20051	0.2235015608659702	No Hit
GCTCTCAACTCAGCGATTTGGCTAATCACCAATGCCTTCTAACCATTTCCA	14287	0.1592522467753287	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	31470	42.99793	12
CACGTCT	31445	42.88903	14
ACGTCTG	31580	42.734184	15
TCGTATG	30580	42.64207	45
GTCACAG	31155	42.62343	29
CGTATCT	30645	42.60941	39
ACACGTC	31760	42.58407	13
CGTCTGA	31660	42.526722	16
AGTCACA	31275	42.519115	28
CAGTCAC	31340	42.48239	27
AGCACAC	32035	42.39407	10
CTCGTAT	30745	42.303455	44
TCCGTAT	31060	42.249207	37
GTATCTC	30995	42.229874	40
ACTCCAG	31580	42.19437	23
CCGTATC	30950	42.1677	38
GTTCCGT	31250	42.02136	35
CCAGTCA	31670	42.00419	26
GCACACG	32345	41.952984	11
GATCGGA	31500	41.92734	1