C55MVACXX l01n01 se391.341000000080eb.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	C55MVACXX l01n01 se391.341000000080eb.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10896785
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC	295809	2.714644732368309	TruSeq Adapter, Index 12 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	35215	42.81077	42
AGTCACC	35375	42.751038	28
GTATGCC	35445	42.732094	45
TCGTATG	35460	42.69322	43
GTAATCT	35330	42.511833	37
CAGTCAC	35830	42.334755	27
TGTAATC	35485	42.325165	36
CGTATGC	35795	42.282837	44
CCAGTCA	35925	42.16642	26
CCTTGTA	35770	42.11905	33
TCTCGTA	35825	42.09419	41
ACTCCAG	36050	42.087273	23
CTTGTAA	35720	42.07762	34
GTCACCT	35930	42.033714	29
TAATCTC	35755	42.013004	38
CACGTCT	36535	41.937355	14
CACACGT	36590	41.917355	12
CGTCTGA	36420	41.90918	16
ACGTCTG	36570	41.884914	15
CTCCAGT	36145	41.883972	24