MK192_GAGTGG_L004_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MK192_GAGTGG_L004_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16989363
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATCTCGTATGCC	767103	4.515195772790304	TruSeq Adapter, Index 7 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	87845	43.325794	45
CACACGT	91045	43.19589	12
ACGTCTG	91380	43.09416	15
GTCTGAA	91970	42.854523	17
CGTCTGA	91980	42.80082	16
GCACACG	92175	42.73224	11
ACGAGTG	88245	42.581112	32
CGTATGC	89550	42.531048	44
CACGTCT	92595	42.52626	14
CTGAACT	92915	42.40489	19
TCTGAAC	92975	42.335888	18
CTCGTAT	90235	42.253082	42
TCGTATG	90770	42.100758	43
CACGAGT	89450	42.0432	31
CAGTCAC	93000	41.88055	27
GTCACGA	92495	41.814133	29
TCTCGTA	91640	41.623333	41
GGATCTC	91295	41.60787	38
GTGGATC	89130	41.55614	36
AGTGGAT	89740	41.3065	35