MK191_CGTACG_L004_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MK191_CGTACG_L004_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13694728
Sequences flagged as poor quality	0
Sequence length	51
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGATCTCGTATGCC	809781	5.913085677933873	TruSeq Adapter, Index 22 (98% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACACGT	94925	43.561234	12
ACGTCTG	95165	43.36659	15
CCGTACG	91110	43.277752	33
GTCTGAA	95695	43.169033	17
CGTCTGA	95640	43.125324	16
ACCGTAC	91985	43.078865	32
CGTACGA	91185	43.0022	34
CACGTCT	96115	42.99881	14
GTATGCC	92740	42.998756	45
CACCGTA	92450	42.98159	31
AGTCACC	92730	42.976257	28
GCACACG	96445	42.956337	11
CTGAACT	96435	42.774784	19
TCTGAAC	96685	42.678143	18
TACGATC	92785	42.613804	36
GTACGAT	93545	42.486614	35
CAGTCAC	96365	42.34528	27
CTCGTAT	94420	42.286133	42
GTCACCG	94320	42.20838	29
CGTATGC	94695	42.17997	44