LW278_ACAGTG_L007_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	LW278_ACAGTG_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28149436
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCC	1143205	4.061200373606065	TruSeq Adapter, Index 5 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	134105	43.28354	11
ACGTCTG	133680	43.269135	15
ACACGTC	133990	43.221622	13
CACGTCT	134100	43.143604	14
CACACGT	134495	43.131264	12
CGTCTGA	134170	43.04419	16
GTATGCC	132560	42.860558	45
AGCACAC	136465	42.622234	10
CGTATGC	133355	42.606728	44
ACTCCAG	133270	42.599323	23
GTCACAC	131695	42.55744	29
GAACTCC	134480	42.46867	21
CACAGTG	130685	42.42531	33
CCAGTCA	132900	42.420025	26
CTCGTAT	133595	42.390373	42
CAGTCAC	133410	42.37255	27
TCCAGTC	133580	42.30002	25
TCGTATG	134705	42.251568	43
GATCTCG	133710	42.23796	39
CACACAG	132820	42.136486	31