LW271_CGTACG_L007_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	LW271_CGTACG_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6450547
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGATCTCGTATGCC	325104	5.039944674459391	TruSeq Adapter, Index 22 (98% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	38415	43.07676	11
CCGTACG	36565	43.021973	33
ACGTCTG	38355	43.02096	15
CACACGT	38470	42.98593	12
CGTACGA	36420	42.95851	34
CACGTCT	38435	42.9545	14
ACACGTC	38535	42.89007	13
CGTCTGA	38515	42.789673	16
CACCGTA	37110	42.67509	31
GTACGAT	36825	42.63879	35
GTCACCG	37460	42.572315	29
AGTCACC	37580	42.55743	28
TACGATC	36800	42.4171	36
TCACCGT	37330	42.39411	30
CCAGTCA	38325	42.388676	26
ACCGTAC	37310	42.349846	32
CAGTCAC	38365	42.3093	27
GAACTCC	38650	42.294216	21
GTATGCC	37395	42.27545	45
AGCACAC	39245	42.23992	10