LW270_GTTTCG_L007_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	LW270_GTTTCG_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6243277
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTTTCGATCTCGTATGCC	179847	2.8806506583001203	TruSeq Adapter, Index 21 (98% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	21105	42.758144	11
GTATGCC	20340	42.534077	45
CACACGT	21240	42.46519	12
ACACGTC	21230	42.4534	13
ACGTCTG	21230	42.368958	15
AGTCACG	20815	42.286507	28
CACGTCT	21315	42.23133	14
CGTCTGA	21275	42.215893	16
CGTATGC	20505	42.16986	44
GTCACGT	20705	42.0208	29
CTCGTAT	20685	41.813778	42
CAGTCAC	21255	41.66552	27
CGATCTC	20400	41.649754	38
TCGTATG	20900	41.545166	43
CCAGTCA	21415	41.522327	26
AGCACAC	21805	41.498985	10
GATCTCG	20670	41.476166	39
GAACTCC	21660	41.260746	21
CGTTTCG	20515	41.19131	33
ACTCCAG	21670	41.179077	23