SV24_CGATGT_L008_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Kmer Content

Basic Statistics

Measure	Value
Filename	SV24_CGATGT_L008_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13156606
Filtered Sequences	0
Sequence length	51
%GC	43

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per base GC content

Per base GC content graph

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	15224	0.11571373346591059	TruSeq Adapter, Index 2 (100% over 51bp)

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
GAAAA	2558280	3.0408795	3.3972387	4
CACAC	1500840	2.879384	5.993513	12